SCUMS
Metagenome overview | Blast your sequences | Current projects | Metagenome white paper | Free data | Publications | Download data | Rohwer lab

DNA Isolating Sequencing | Uploading Sequences, Basic Statistics
Blast against Seed, GO & KEGG | Boutique databases, Mapping onto Trees | Assemblies, Community Modeling


Members Login 
User:
Pass:
SCUMS

Metagenome overview:
  Get the metagenome description, location, name, etc...

BLAST the SCUMS!
  Blast your own sequences against the sequences on SCUMS

Current Projects:

Ocean Viruses

- Viral metagenomes from 4 different oceanic regions
- contacts Florent Angly


Coral reefs of the Northern Line Islands


- microbial and viral metagenomes from 4 different coral reefs experiencing different levels of anthropogenic stress
- unpublished
- contacts Elizabeth Dinsdale and Florent Angly


Solar Salterns - San Diego, CA


- microbial and viral metagenomes from 3 solar salterns with dramatically different salt concentrations
- unpublished
- contacts Beltran Rodriguez Brito


Stromatolites


- microbial and viral metagenomes from 3 different microbiolites
- unpublished
- contacts Christelle Desnues and Mya Breitbart


Aquaculture ponds


- microbial and viral metagenomes from aquaculture ponds and fish
- unpublished
- contacts Linlin Li and Christelle Desnues


Porites astreoides


- metagenome from the coral Porites astreoides
- unpublished
- contacts Linda Wegley


Mosquito viruses


- viral metagenomes from mosquitos
- unpublished
- contacts Betty Chau


Porites Compressa


- unpublished
- contacts Rebecca Lisette Vega Thurber


Lung Viruses


- unpublished
- contacts Mike Furlan



Sponsored by




`